1 | Department of Tamil | M.A., Tamil |  |
2 | Department of English and Foreign Languages | M.A., English |  |
3 | Department of Fine Arts | BFA (Painting), BPA (Music), BPA (Bharathanatyam), MPA (Music), MPA (Bharathanatyam) |  |
4 | Department of Women Studies | M.A., (Gender Studies), M.A., Integrated Home Science | 
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5 | Department of Social Work | M.S.W., (Social Work) |  |
6 | Department of Economics and Rural Development | M.A., Economics |  |
7 | Department of History | M.A., History |  |
8 | Department of Library and Information Science | M.Lib.I.Sc |  |
9 | Department of Mathematics | M.Sc., Maths |  |
10 | Department of Physics | M.Sc., Physics |  |
11 | Department of Bioelectronics and Biosensors | M.Sc., Material Science |  |
12 | Department of Industrial Chemistry | M.Sc ., Chemistry |  |
13 | Department of Nanoscience and Technology | M.Sc., Nanoscience, M.Sc.,Chemistry (specialization Nanoscience & Technology) | 
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14 | Department of Energy Science | M.Sc Energy Science |  |
15 | Department of Computer Science | M.Sc., Computer Science |  |
16 | Department of Computer Application | M.C.A |  |
17 | Department of Computational Logistics | M.Sc (Information Technology) |  |
18 | Department of Biotechnology | M.Sc., Biotechnology |  |
19 | Department of Animal Health and Management | M.Sc., Zoology |  |
20 | Department of Bioinformatics | M.Sc., Bioinformatics |  |
21 | Department of Botany | M.Sc., Botany |  |
22 | Department of Microbiology | M.Sc., Microbiology |  |
23 | Department of Biomedical Sciences | M.Sc., Biomedical Science |  |
24 | Department of Oceanography and Coastal Area Studies | M.Sc., Oceanography and Coastal Area Studies, M.Sc., Marine Biology (5 years Integrated) |  |
25 | Department of Geology | M.Sc., Applied Geology |  |
26 | Department of Fisheries Science | M.Sc., Fishery Science |  |
27 | Alagappa Institute of Management | M.B.A., General |  |
28 | Department of Logistics Management | M.B.A., Logistics Management |  |
29 | Department of International Business | M.B.A., International Business |  |
30 | Department of Commerce | M.Com |  |
31 | Department of Corporate Secretaryship | M.B.A., Corporate Secretaryship |  |
32 | Department of Banking Management | M.B.A., Banking and Insurance |  |
33 | Department of Tourism and Hotel Management | B.Sc., Catering Science & Hotel Management, MBA., Tourism Management | 
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34 | Department of Education | M.Ed., Education |  |
35 | Alagappa University College of Education | B.Ed., |  |
36 | Department of Physical Education and Health Sciences | M.Sc., Yoga |  |
37 | Alagappa University College of Physical Education | B.P.Ed., M.P.Ed., B.Sc., Physical Education |  |
38 | Department of Special Education and Rehabilitation Science | B.Ed Special Education & Visual Impairment B.Ed., Special Education & Mental Retardation M.Ed., Special Education & Visual Impairment M.SC., Applied Psychology |  |
39 | Alagappa Institute of Skill Development | B.Voc., Fashion Technology, B.Voc., Software Development, M.Voc., Fashion Technology, M.Voc., Software Development |  |
40 | Department of Politics and Public Administration | M.A., Public Administration |  |
41 | Department of Disaster Management | M.B.A., Disaster Management |  |
42 | Department of Theatre and Film studies | M.A., Theatre and Film Studies |  |
43 | Centre for Yoga Education | B.Sc., Yoga |  |
44 | Department of Journalism and Mass Communication | M.A., Journalism and Mass communication |  |